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co18
Starting Member

Singapore
9 Posts
Posted - Mar 27 2007 :  1:25:59 PM  Show Profile  Click to see co18's MSN Messenger address  Reply with Quote
Hi,

When trying to run bxh2analyze, I keep getting the following error msg on Golgi. Can anyone tell me how to solve the problem? Thanks

exec(): 0509-036 Cannot load program bxh2analyze because of the following errors:
0509-130 Symbol resolution failed for bxh2analyze because:

Yours,
Ooi

syam.gadde
BIAC Staff

USA
421 Posts
Posted - Mar 27 2007 :  1:48:23 PM  Show Profile  Reply with Quote
I'm not sure why this is happening. Do you get the same error running bxh2analyze without arguments? Are you running a version of bxh2analyze other than the default installed one? What is the result of the command "which bxh2analyze"?
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co18
Starting Member

Singapore
9 Posts
Posted - Mar 27 2007 :  1:53:55 PM  Show Profile  Click to see co18's MSN Messenger address  Reply with Quote
Hi,

I do not get the same error when I run it from the directory directly with Golgi, with the exact same arguments. Sorry I didn't make things clear, but I am trying to run the program from within Matlab in Golgi, with a script in Matlab.

When I run which bxh2analyze, it says:

/usr/local/bin/bxh2analyze

Thanks.
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co18
Starting Member

Singapore
9 Posts
Posted - Mar 27 2007 :  1:59:46 PM  Show Profile  Click to see co18's MSN Messenger address  Reply with Quote
Hi,

If it's any help, I copied and pasted the whole error message below:

exec(): 0509-036 Cannot load program bxh2analyze because of the following errors:
0509-130 Symbol resolution failed for bxh2analyze because:


0509-136 Symbol adjustfield__Q2_3std8ios_base (number 146) is not exported from
dependent module /usr/local/matlab6p5p1/sys/os/ibm_rs/libC.a(ansi_32.o).

(Above error message repeated about 20 times)

0509-192 Examine .loader section symbols with the
'dump -Tv' command.
bxh2analyze --niftihdr -v run005_02.bxh run02: Signal 127

Thanks
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syam.gadde
BIAC Staff

USA
421 Posts
Posted - Mar 27 2007 :  2:03:52 PM  Show Profile  Reply with Quote
It looks like MATLAB has its own versions of certain libraries that conflict with bxh2analyze. Instead of: 
system('bxh2analyze...')
you can try: 
system('env LIBPATH= bxh2analyze...')
note the space after the equals sign and before bxh2analyze.
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co18
Starting Member

Singapore
9 Posts
Posted - Mar 27 2007 :  3:18:02 PM  Show Profile  Click to see co18's MSN Messenger address  Reply with Quote
Hi,

It seems to be working now. Thanks a lot for your help.

Yours,
Ooi
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