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 FSL v5.0.1 now default
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petty
BIAC Staff

USA
453 Posts

Posted - Jan 08 2013 :  10:13:52 AM  Show Profile  Reply with Quote

Dear Users,

Since we just finished a series of fsl tutorials i thought it would be a good time to update the default version of FSL. Also, since 5.0 was released there are some new tools that wouldn't otherwise be obvious.

As always, the older versions of fsl remain on the cluster and can be used by changing the fsldir environmental variable and then calling the tools with their full path.

current version is now:
5.0.1


To continue to use an older version, you'll need to export the version and source the setup in your scripts or in your ~/.bash_profile like below:


export FSLDIR=$PACKDIR/fsl-4.1.8
. ${FSLDIR}/etc/fslconf/fsl.sh

#then call tools with the fullpath
${FSLDIR}/bin/fsl



The previous default was v4.1.8. Older design.fsf files will not run with the newer versions, so please be sure to set your version if you wish to keep using the previous default.

The list of installed packages and their versions can always be found here:http://wiki.biac.duke.edu/biac:cluster:packages

Thanks,
-Chris
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