| T O P I C R E V I E W |
| D.Smith |
Posted - Jul 28 2006 : 4:32:43 PM
We are trying to cut down on man hours with SPM analysis. We have many files to run through SPM with similar parameters and we are looking for a way to automate this process. Ideally we could set the analysis options once and then tell SPM in which folders the data is located. Is there a way to do this? Parhaps a toolbox that does this? If so, which is the best to use?
Thanks! |
| 2 L A T E S T R E P L I E S (Newest First) |
| jimmy.dias |
Posted - Jul 31 2006 : 11:22:16 AM
SPM2, SPM99, and SPM5 all have different batch functionality, so if you're going to be processing across SPM versions, I would advocate calling each of the functions directly with the appropriate parameters instead of using their built in mechanisms.
The following script might be a good place to start.
http://en.wikibooks.org/wiki/SPM-Example_batch_script
Jimmy
|
| josh.bizzell |
Posted - Jul 31 2006 : 09:37:05 AM
The easiest thing to do is to run SPM without using the GUI by writing Matlab scripts that directly call SPM functions. I have some sample scripts that can be used for SPM5... send an email if you're interested.
-Josh |
