| T O P I C R E V I E W |
| aawineco |
Posted - May 01 2009 : 2:48:51 PM
I keep getting the below error message. I cannot seem to figure out why this is happening. Earlier I ran a script, and it worked, so I don't think this has much to do with my profile. Any thoughts?
[winecoff@head AgEmoReg.02]$ qsub -v EXPERIMENT=AgEmoReg.02 PPI.sh 48044 1
qsub: Unknown option
qsub: Unknown option |
| 3 L A T E S T R E P L I E S (Newest First) |
| petty |
Posted - May 01 2009 : 4:03:46 PM
no .. i mean things in the Global directive sections, etc ... any thing that looks commented out like (#$ -M) is actually feeding options to qsub.
try taking the sample script and putting you code back in there ... the sample has basic things that qsub is expecting. |
| aawineco |
Posted - May 01 2009 : 3:58:12 PM
these are both in my script
SUBJ=$1
RUN=$2
Is that what you mean? |
| petty |
Posted - May 01 2009 : 3:31:43 PM
looks like some things (qsub options) at the top of your script were cut off ... |
